Papers using khmer

khmer was first published in Scaling metagenome sequence assembly with probabilistic de Bruijn graphs, Pell et al., 2012.

Since then, we have published several additional papers.

Please also see the instructions for citing our papers and software.

Biological uses outside of the group

See this list of papers for publications using khmer to analyze their sequencing data.

Tools building on khmer concepts

Several research papers have built off of concepts introduced in or elaborated on khmer.

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